mvMORPH: Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data

Fits multivariate (Brownian Motion, Early Burst, ACDC, Ornstein-Uhlenbeck and Shifts) models of continuous traits evolution on trees and time series. 'mvMORPH' also proposes high-dimensional multivariate comparative tools (linear models using Generalized Least Squares and multivariate tests) based on penalized likelihood. See Clavel et al. (2015) <doi:10.1111/2041-210X.12420>, Clavel et al. (2019) <doi:10.1093/sysbio/syy045>, and Clavel & Morlon (2020) <doi:10.1093/sysbio/syaa010>.

Version: 1.1.4
Depends: R (≥ 3.5.0), phytools, ape, corpcor, subplex
Imports: stats, spam, graphics, glassoFast, parallel, pbmcapply
Suggests: knitr, rmarkdown, car
Published: 2021-03-17
Author: Julien Clavel, with contributions from Aaron King, and Emmanuel Paradis
Maintainer: Julien Clavel <julien.clavel at hotmail.fr>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)]
URL: https://github.com/JClavel/mvMORPH
NeedsCompilation: yes
Citation: mvMORPH citation info
Materials: README NEWS
In views: Phylogenetics
CRAN checks: mvMORPH results

Documentation:

Reference manual: mvMORPH.pdf
Vignettes: How to use mvMORPH?
mvMORPH: an R package for fitting multivariate evolutionary models

Downloads:

Package source: mvMORPH_1.1.4.tar.gz
Windows binaries: r-devel: mvMORPH_1.1.4.zip, r-devel-UCRT: mvMORPH_1.1.4.zip, r-release: mvMORPH_1.1.4.zip, r-oldrel: mvMORPH_1.1.4.zip
macOS binaries: r-release (arm64): mvMORPH_1.1.4.tgz, r-release (x86_64): mvMORPH_1.1.4.tgz, r-oldrel: mvMORPH_1.1.4.tgz
Old sources: mvMORPH archive

Reverse dependencies:

Reverse imports: ratematrix, RPANDA
Reverse suggests: bite, RRphylo

Linking:

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