Generate a candidate code list for the Observational Medical Outcomes Partnership (OMOP) common data model based on string matching. For a given search strategy, a candidate code list will be returned.
Version: | 3.3.1 |
Depends: | R (≥ 3.5.0) |
Imports: | checkmate (≥ 2.0.0), DBI (≥ 1.1.0), dplyr (≥ 1.1.0), omopgenerics (≥ 0.4.0), rlang (≥ 1.0.0), glue (≥ 1.5.0), stringr (≥ 1.4.0), tidyselect (≥ 1.2.0), tidyr (≥ 1.2.0), cli (≥ 3.1.0), purrr, lubridate, PatientProfiles (≥ 1.1.0), vctrs, visOmopResults (≥ 0.5.0), RJSONIO |
Suggests: | covr, duckdb, CDMConnector (≥ 1.3.0), knitr, rmarkdown, testthat (≥ 3.0.0), RPostgres, odbc, spelling, tibble, gt, flextable |
Published: | 2024-11-26 |
DOI: | 10.32614/CRAN.package.CodelistGenerator |
Author: | Edward Burn [aut, cre], Marti Catala [ctb], Xihang Chen [aut], Nuria Mercade-Besora [aut], Mike Du [ctb], Danielle Newby [ctb] |
Maintainer: | Edward Burn <edward.burn at ndorms.ox.ac.uk> |
License: | Apache License (≥ 2) |
URL: | https://darwin-eu.github.io/CodelistGenerator/ |
NeedsCompilation: | no |
Language: | en-US |
Materials: | README NEWS |
CRAN checks: | CodelistGenerator results |
Reference manual: | CodelistGenerator.pdf |
Vignettes: |
01_Introduction_to_CodelistGenerator (source, R code) a02_Candidate_codes_OA (source, R code) 03_Options_for_CodelistGenerator (source, R code) a04_vocab_based_codelists (source, R code) |
Package source: | CodelistGenerator_3.3.1.tar.gz |
Windows binaries: | r-devel: CodelistGenerator_3.3.1.zip, r-release: CodelistGenerator_3.3.1.zip, r-oldrel: CodelistGenerator_3.3.1.zip |
macOS binaries: | r-release (arm64): CodelistGenerator_3.3.1.tgz, r-oldrel (arm64): CodelistGenerator_3.3.1.tgz, r-release (x86_64): CodelistGenerator_3.3.1.tgz, r-oldrel (x86_64): CodelistGenerator_3.3.1.tgz |
Old sources: | CodelistGenerator archive |
Reverse imports: | CohortSymmetry, DrugUtilisation |
Reverse suggests: | CohortCharacteristics, CohortConstructor, CohortSurvival, OmopSketch, OmopViewer, PatientProfiles |
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