CRAN Package Check Results for Package cmcR

Last updated on 2022-12-04 09:55:14 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.9 8.22 105.75 113.97 OK
r-devel-linux-x86_64-debian-gcc 0.1.9 6.02 77.93 83.95 ERROR
r-devel-linux-x86_64-fedora-clang 0.1.9 154.41 ERROR
r-devel-linux-x86_64-fedora-gcc 0.1.9 164.96 ERROR
r-devel-windows-x86_64 0.1.9 23.00 141.00 164.00 ERROR
r-patched-linux-x86_64 0.1.9 5.24 97.56 102.80 ERROR
r-release-linux-x86_64 0.1.9 4.96 102.98 107.94 OK
r-release-macos-arm64 0.1.9 52.00 OK
r-release-macos-x86_64 0.1.9 89.00 OK
r-release-windows-x86_64 0.1.9 36.00 155.00 191.00 OK
r-oldrel-macos-arm64 0.1.9 45.00 OK
r-oldrel-macos-x86_64 0.1.9 67.00 OK
r-oldrel-windows-ix86+x86_64 0.1.9 15.00 148.00 163.00 OK

Check Details

Version: 0.1.9
Check: tests
Result: ERROR
     Running ‘testthat.R’ [24s/37s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(cmcR)
     >
     > test_check("cmcR",reporter = SummaryReporter)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 73%)
     adding: main.xml (deflated 62%)
     adding: md5checksum.hex (stored 0%)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 71%)
     adding: main.xml (deflated 62%)
     adding: md5checksum.hex (stored 0%)
     comparison: WWWWWWW..
     decision: WW............
     diagnosticTools: 1
     preProcess: S
    
     ══ Skipped ═════════════════════════════════════════════════════════════════════
     1. preProcess_ functions work as expected ('test-preProcess.R:5') - Reason: On CRAN
    
     ══ Warnings ════════════════════════════════════════════════════════════════════
     1. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellIndex"` instead of `.data$cellIndex`
    
     2. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellHeightValues"` instead of `.data$cellHeightValues`
    
     3. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf_df"` instead of `.data$fft_ccf_df`
    
     4. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"x"` instead of `.data$x`
    
     5. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"y"` instead of `.data$y`
    
     6. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf"` instead of `.data$fft_ccf`
    
     7. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"pairwiseCompCor"` instead of `.data$pairwiseCompCor`
    
     8. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"originalMethodClassif"` instead of `.data$originalMethodClassif`
    
     9. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"highCMCClassif"` instead of `.data$highCMCClassif`
    
     ══ Failed ══════════════════════════════════════════════════════════════════════
     ── 1. Error ('test-diagnosticTools.R:55'): (code run outside of `test_that()`) ─
     Error in `stringr::str_extract_all(., string = ..2$cmcR.info$cellRange,
     pattern = "[0-9]{1,}")`: `simplify` must be `TRUE` or `FALSE`, not the string "rows: 1 - 69, cols: 1 - 69".
     Backtrace:
     1. cmcR::cmcPlot(...)
     at test-diagnosticTools.R:55:0
     8. stringr::str_extract_all(simplify = .)
    
     ══ DONE ════════════════════════════════════════════════════════════════════════
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.1.9
Check: tests
Result: ERROR
     Running ‘testthat.R’ [42s/141s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(cmcR)
     >
     > test_check("cmcR",reporter = SummaryReporter)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 73%)
     adding: main.xml (deflated 62%)
     adding: md5checksum.hex (stored 0%)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 71%)
     adding: main.xml (deflated 62%)
     adding: md5checksum.hex (stored 0%)
     comparison: WWWWWWW..
     decision: WW............
     diagnosticTools: 1
     preProcess: S
    
     ══ Skipped ═════════════════════════════════════════════════════════════════════
     1. preProcess_ functions work as expected ('test-preProcess.R:5') - Reason: On CRAN
    
     ══ Warnings ════════════════════════════════════════════════════════════════════
     1. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellIndex"` instead of `.data$cellIndex`
    
     2. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellHeightValues"` instead of `.data$cellHeightValues`
    
     3. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf_df"` instead of `.data$fft_ccf_df`
    
     4. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"x"` instead of `.data$x`
    
     5. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"y"` instead of `.data$y`
    
     6. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf"` instead of `.data$fft_ccf`
    
     7. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"pairwiseCompCor"` instead of `.data$pairwiseCompCor`
    
     8. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"originalMethodClassif"` instead of `.data$originalMethodClassif`
    
     9. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"highCMCClassif"` instead of `.data$highCMCClassif`
    
     ══ Failed ══════════════════════════════════════════════════════════════════════
     ── 1. Error ('test-diagnosticTools.R:55'): (code run outside of `test_that()`) ─
     Error in `stringr::str_extract_all(., string = ..2$cmcR.info$cellRange,
     pattern = "[0-9]{1,}")`: `simplify` must be `TRUE` or `FALSE`, not the string "rows: 1 - 69, cols: 1 - 69".
     Backtrace:
     1. cmcR::cmcPlot(...)
     at test-diagnosticTools.R:55:0
     8. stringr::str_extract_all(simplify = .)
    
     ══ DONE ════════════════════════════════════════════════════════════════════════
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.1.9
Check: tests
Result: ERROR
     Running ‘testthat.R’ [41s/104s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(cmcR)
     >
     > test_check("cmcR",reporter = SummaryReporter)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 73%)
     adding: main.xml (deflated 62%)
     adding: md5checksum.hex (stored 0%)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 71%)
     adding: main.xml (deflated 62%)
     adding: md5checksum.hex (stored 0%)
     comparison: WWWWWWW..
     decision: WW............
     diagnosticTools: 1
     preProcess: S
    
     ══ Skipped ═════════════════════════════════════════════════════════════════════
     1. preProcess_ functions work as expected ('test-preProcess.R:5') - Reason: On CRAN
    
     ══ Warnings ════════════════════════════════════════════════════════════════════
     1. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellIndex"` instead of `.data$cellIndex`
    
     2. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellHeightValues"` instead of `.data$cellHeightValues`
    
     3. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf_df"` instead of `.data$fft_ccf_df`
    
     4. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"x"` instead of `.data$x`
    
     5. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"y"` instead of `.data$y`
    
     6. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf"` instead of `.data$fft_ccf`
    
     7. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"pairwiseCompCor"` instead of `.data$pairwiseCompCor`
    
     8. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"originalMethodClassif"` instead of `.data$originalMethodClassif`
    
     9. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"highCMCClassif"` instead of `.data$highCMCClassif`
    
     ══ Failed ══════════════════════════════════════════════════════════════════════
     ── 1. Error ('test-diagnosticTools.R:55'): (code run outside of `test_that()`) ─
     Error in `stringr::str_extract_all(., string = ..2$cmcR.info$cellRange,
     pattern = "[0-9]{1,}")`: `simplify` must be `TRUE` or `FALSE`, not the string "rows: 1 - 69, cols: 1 - 69".
     Backtrace:
     1. cmcR::cmcPlot(...)
     at test-diagnosticTools.R:55:0
     8. stringr::str_extract_all(simplify = .)
    
     ══ DONE ════════════════════════════════════════════════════════════════════════
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.1.9
Check: tests
Result: ERROR
     Running 'testthat.R' [36s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(cmcR)
     >
     > test_check("cmcR",reporter = SummaryReporter)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 73%)
     adding: main.xml (deflated 63%)
     adding: md5checksum.hex (stored 0%)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 71%)
     adding: main.xml (deflated 63%)
     adding: md5checksum.hex (stored 0%)
     comparison: WWWWWWW..
     decision: WW............
     diagnosticTools: 1
     preProcess: S
    
     ══ Skipped ═════════════════════════════════════════════════════════════════════
     1. preProcess_ functions work as expected ('test-preProcess.R:5') - Reason: On CRAN
    
     ══ Warnings ════════════════════════════════════════════════════════════════════
     1. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellIndex"` instead of `.data$cellIndex`
    
     2. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellHeightValues"` instead of `.data$cellHeightValues`
    
     3. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf_df"` instead of `.data$fft_ccf_df`
    
     4. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"x"` instead of `.data$x`
    
     5. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"y"` instead of `.data$y`
    
     6. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf"` instead of `.data$fft_ccf`
    
     7. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"pairwiseCompCor"` instead of `.data$pairwiseCompCor`
    
     8. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"originalMethodClassif"` instead of `.data$originalMethodClassif`
    
     9. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"highCMCClassif"` instead of `.data$highCMCClassif`
    
     ══ Failed ══════════════════════════════════════════════════════════════════════
     ── 1. Error ('test-diagnosticTools.R:55'): (code run outside of `test_that()`) ─
     Error in `stringr::str_extract_all(., string = ..2$cmcR.info$cellRange,
     pattern = "[0-9]{1,}")`: `simplify` must be `TRUE` or `FALSE`, not the string "rows: 1 - 69, cols: 1 - 69".
     Backtrace:
     1. cmcR::cmcPlot(...)
     at test-diagnosticTools.R:55:0
     8. stringr::str_extract_all(simplify = .)
    
     ══ DONE ════════════════════════════════════════════════════════════════════════
     Error: Test failures
     Execution halted
Flavor: r-devel-windows-x86_64

Version: 0.1.9
Check: tests
Result: ERROR
     Running ‘testthat.R’ [32s/37s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(cmcR)
     >
     > test_check("cmcR",reporter = SummaryReporter)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 73%)
     adding: main.xml (deflated 62%)
     adding: md5checksum.hex (stored 0%)
     adding: bindata/ (stored 0%)
     adding: bindata/data.bin (deflated 71%)
     adding: main.xml (deflated 62%)
     adding: md5checksum.hex (stored 0%)
     comparison: WWWWWWW..
     decision: WW............
     diagnosticTools: 1
     preProcess: S
    
     ══ Skipped ═════════════════════════════════════════════════════════════════════
     1. preProcess_ functions work as expected ('test-preProcess.R:5') - Reason: On CRAN
    
     ══ Warnings ════════════════════════════════════════════════════════════════════
     1. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellIndex"` instead of `.data$cellIndex`
    
     2. (code run outside of `test_that()`) ('test-comparison.R:7') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"cellHeightValues"` instead of `.data$cellHeightValues`
    
     3. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf_df"` instead of `.data$fft_ccf_df`
    
     4. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"x"` instead of `.data$x`
    
     5. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"y"` instead of `.data$y`
    
     6. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"fft_ccf"` instead of `.data$fft_ccf`
    
     7. (code run outside of `test_that()`) ('test-comparison.R:27') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"pairwiseCompCor"` instead of `.data$pairwiseCompCor`
    
     8. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"originalMethodClassif"` instead of `.data$originalMethodClassif`
    
     9. (code run outside of `test_that()`) ('test-decision.R:128') - Use of .data in tidyselect expressions was deprecated in tidyselect 1.2.0.
     ℹ Please use `"highCMCClassif"` instead of `.data$highCMCClassif`
    
     ══ Failed ══════════════════════════════════════════════════════════════════════
     ── 1. Error ('test-diagnosticTools.R:55'): (code run outside of `test_that()`) ─
     Error in `stringr::str_extract_all(., string = ..2$cmcR.info$cellRange,
     pattern = "[0-9]{1,}")`: `simplify` must be `TRUE` or `FALSE`, not the string "rows: 1 - 69, cols: 1 - 69".
     Backtrace:
     1. cmcR::cmcPlot(...)
     at test-diagnosticTools.R:55:0
     8. stringr::str_extract_all(simplify = .)
    
     ══ DONE ════════════════════════════════════════════════════════════════════════
     Error: Test failures
     Execution halted
Flavor: r-patched-linux-x86_64