# ChangeLog for sci-biology/vienna-rna
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.47 2013/02/13 13:13:57 jlec Exp $

*vienna-rna-2.1.1 (13 Feb 2013)

  13 Feb 2013; Justin Lecher <jlec@gentoo.org> +vienna-rna-2.1.1.ebuild,
  +files/vienna-rna-2.1.1-bindir.patch,
  +files/vienna-rna-2.1.1-impl-decl.patch, +files/vienna-rna-2.1.1-prll.patch,
  +files/vienna-rna-2.1.1-setup.py:
  Version Bump; move to EAPI=5, new python eclasses; autotools-utils

  31 Jan 2013; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild,
  metadata.xml:
  Only call distutils phase functions with USE=python, #422899

  10 Jul 2012; Justin Lecher <jlec@gentoo.org> -vienna-rna-1.8.4-r1.ebuild,
  -vienna-rna-1.8.4-r2.ebuild, metadata.xml:
  Cleaned old

  10 Jul 2012; Brent Baude <ranger@gentoo.org> vienna-rna-1.8.5.ebuild:
  Marking vienna-rna-1.8.5 ppc for bug 393867

  26 Feb 2012; Patrick Lauer <patrick@gentoo.org> vienna-rna-1.8.4-r1.ebuild,
  vienna-rna-1.8.5.ebuild:
  Restricting jython

  21 Dec 2011; Pawel Hajdan jr <phajdan.jr@gentoo.org> vienna-rna-1.8.5.ebuild:
  x86 stable wrt bug #393867

  16 Dec 2011; Agostino Sarubbo <ago@gentoo.org> vienna-rna-1.8.5.ebuild:
  Stable for AMD64, wrt bug #393867

  16 Dec 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild:
  Add missing dep on dev-lang/swig, #394933

  16 Dec 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild:
  Handle static-libs

  28 Jun 2011; Brent Baude <ranger@gentoo.org> vienna-rna-1.8.4-r1.ebuild:
  Marking vienna-rna-1.8.4-r1 ppc for bug 325459 

  03 May 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild,
  +files/vienna-rna-1.8.5-setup.py:
  Added python support, #365793

  20 Mar 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.4-r1.ebuild,
  vienna-rna-1.8.4-r2.ebuild, vienna-rna-1.8.5.ebuild:
  Install Perl modules into vendor-dir, #349772

*vienna-rna-1.8.5 (20 Mar 2011)

  20 Mar 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.4-r1.ebuild,
  vienna-rna-1.8.4-r2.ebuild, +vienna-rna-1.8.5.ebuild:
  Version Bump

*vienna-rna-1.8.4-r2 (15 Oct 2010)

  15 Oct 2010; Kacper Kowalik <xarthisius@gentoo.org>
  -files/vienna-rna-1.7.2-disable-gd.patch,
  -files/vienna-rna-1.7.2-gcc4.3.patch,
  -files/vienna-rna-1.7.2-gcc4.4.patch, -vienna-rna-1.8.4.ebuild,
  +vienna-rna-1.8.4-r2.ebuild, +files/vienna-rna-1.8.4-implicits.patch,
  +files/vienna-rna-1.8.4-overflows.patch:
  Fix buffer overflows wrt bug 341089. Thanks to Diego for the report. Fix
  implicit function declarations. Drop old.

  15 Jul 2010; Christian Faulhammer <fauli@gentoo.org>
  vienna-rna-1.8.4-r1.ebuild:
  stable x86, bug 325459

  26 Jun 2010; Christoph Mende <angelos@gentoo.org>
  vienna-rna-1.8.4-r1.ebuild:
  Stable on amd64 wrt bug #325459

*vienna-rna-1.8.4-r1 (25 Jun 2010)

  25 Jun 2010; Justin Lecher <jlec@gentoo.org> -vienna-rna-1.7.2.ebuild,
  -vienna-rna-1.8.3.ebuild, +vienna-rna-1.8.4-r1.ebuild,
  +files/vienna-rna-1.8.4-bindir.patch:
  Install ELFs in correct place, #300012

  03 Apr 2010; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.4.ebuild,
  +files/vienna-rna-1.8.4-jobserver-fix.patch:
  jobserver fix, #304117, thanks Myckel

  09 Feb 2010; Pacho Ramos <pacho@gentoo.org> vienna-rna-1.8.4.ebuild:
  amd64 stable, bug 298769

  29 Dec 2009; Christian Faulhammer <fauli@gentoo.org>
  vienna-rna-1.8.4.ebuild:
  stable x86, bug 298769

*vienna-rna-1.8.4 (13 Nov 2009)

  13 Nov 2009; Andrey Kislyuk <weaver@gentoo.org> +vienna-rna-1.8.4.ebuild:
  Version bump

  02 Nov 2009; Markus Meier <maekke@gentoo.org> vienna-rna-1.8.3.ebuild:
  amd64/x86 stable, bug #290926

  31 Oct 2009; Andrey Kislyuk <weaver@gentoo.org> vienna-rna-1.8.3.ebuild:
  Fix linking failure on x86

  10 Sep 2009; Andrey Kislyuk <weaver@gentoo.org> vienna-rna-1.8.3.ebuild:
  Fix gcc-4.4 patching, bug 284539

*vienna-rna-1.8.3 (10 Sep 2009)

  10 Sep 2009; Andrey Kislyuk <weaver@gentoo.org>
  +files/vienna-rna-1.8.3-gcc4.3.patch, +vienna-rna-1.8.3.ebuild:
  Version bump and cleanup

  30 Jul 2009; Samuli Suominen <ssuominen@gentoo.org>
  vienna-rna-1.7.2.ebuild, +files/vienna-rna-1.7.2-gcc4.4.patch:
  Fix building with GCC 4.4 and GLIBC 2.10+ wrt #274044. Rename getline to
  v_getline. Missing include.

  09 Oct 2008; Markus Dittrich <markusle@gentoo.org>
  vienna-rna-1.7.2.ebuild:
  Remove perlocal.pod file to avoid file collisions (see bug #240358).

  06 Oct 2008; Markus Dittrich <markusle@gentoo.org>
  +files/vienna-rna-1.7.2-LDFLAGS.patch,
  +files/vienna-rna-1.7.2-disable-gd.patch, vienna-rna-1.7.2.ebuild:
  Fixed ignored LDFLAGS issues and bogus detection of GD support. Also
  enabled the tests that come with the package.

*vienna-rna-1.7.2 (28 Aug 2008)

  28 Aug 2008; Markus Dittrich <markusle@gentoo.org>
  +files/vienna-rna-1.7.2-gcc4.3.patch, -vienna-rna-1.6.1.ebuild,
  -vienna-rna-1.6.5.ebuild, +vienna-rna-1.7.2.ebuild:
  Version bump and removed old ebuilds (fixes bug #235943). Thanks much to
  Chad A. Simmons <chad.simmons@member.fsf.org> for his ebuild and patches.

  06 Aug 2008; Ulrich Mueller <ulm@gentoo.org> metadata.xml:
  Add USE flag description to metadata wrt GLEP 56.

*vienna-rna-1.7.0 (01 May 2008)

  01 May 2008; Markus Dittrich <markusle@gentoo.org>
  +vienna-rna-1.7.0.ebuild:
  Version bump.

*vienna-rna-1.6.5 (24 Nov 2007)

  24 Nov 2007; Markus Dittrich <markusle@gentoo.org>
  +files/vienna-rna-1.6.5-c-fixes.patch, +vienna-rna-1.6.5.ebuild:
  Version bump (fixes bug #191882).

  29 Apr 2007; Jeff Gardner <je_fro@gentoo.org> vienna-rna-1.6.1.ebuild:
  Adding ~amd64.

  22 Feb 2007; Markus Ullmann <jokey@gentoo.org> ChangeLog:
  Redigest for Manifest2

  03 Nov 2006; Olivier Fisette <ribosome@gentoo.org> -vienna-rna-1.6.ebuild:
  Pruned old version.

  14 Sep 2006; Olivier Fisette <ribosome@gentoo.org> metadata.xml:
  Stepping down from maintaining this package.

*vienna-rna-1.6.1 (14 Sep 2006)

  14 Sep 2006; Olivier Fisette <ribosome@gentoo.org>
  +vienna-rna-1.6.1.ebuild:
  New upstream version.

*vienna-rna-1.6 (03 Feb 2006)

  03 Feb 2006; Olivier Fisette <ribosome@gentoo.org>
  -vienna-rna-1.5_beta.ebuild, -vienna-rna-1.6_alpha.ebuild,
  +vienna-rna-1.6.ebuild:
  Removed alpha and beta versions. New version. Removed dependency on X11.

*vienna-rna-1.6_alpha (19 Oct 2005)

  19 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
  +vienna-rna-1.6_alpha.ebuild:
  New version.

  30 Aug 2005; Olivier Fisette <ribosome@gentoo.org>
  vienna-rna-1.5_beta.ebuild:
  Added to x86.

  30 Jan 2005; Olivier Fisette <ribosome@gentoo.org> vienna-rna-1.4.ebuild:
  Ebuild cleanup.

*vienna-rna-1.5_beta (09 Jan 2005)

  09 Jan 2005; Olivier Fisette <ribosome@gentoo.org>
  +vienna-rna-1.5_beta.ebuild:
  Added new beta release (hard-masked).

*vienna-rna-1.4 (23 Dec 2004)

  23 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
  +vienna-rna-1.4.ebuild:
  Moved from app-sci/vienna-rna to sci-biology/vienna-rna.

  31 Oct 2004; Olivier Fisette <ribosome@gentoo.org> vienna-rna-1.4.ebuild:
  Added to x86.

  23 Jun 2004; David Holm <dholm@gentoo.org> vienna-rna-1.4.ebuild:
  Added to ~ppc.

*vienna-rna-1.4 (22 Jun 2004)

  22 Jun 2004; Olivier Fisette <ribosome@gentoo.org>
  vienna-rna-1.4.ebuild, metadata.xml :
  Initial import. Ebuild submitted by Olivier Fisette <ribosome@gentoo.org>.
  Reference: Gentoo Bugzilla, bug #53734

